BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F03LP1|AL429427
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1864 0.0
>3x_Contig1800
Length = 38778
Score = 1864 bits (937), Expect = 0.0
Identities = 969/979 (98%), Gaps = 3/979 (0%)
Strand = Plus / Minus
Query: 1 tgagtggtctacaaacttctatgatgtattgtagcagtatcttcgtatgttcaatatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35341 tgagtggtctacaaacttctatgatgtattgtagcagtatcttcgtatgttcaatatagg 35282
Query: 61 attgttatgtatgctatgcaaatatcatgctttacattaaagaaaacagaaatgtaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35281 attgttatgtatgctatgcaaatatcatgctttacattaaagaaaacagaaatgtaatta 35222
Query: 121 tgtactgagctgtaatttatgagttaaatatgtagaggcttcaatggcatagtagcggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35221 tgtactgagctgtaatttatgagttaaatatgtagaggcttcaatggcatagtagcggat 35162
Query: 181 cctagaagtagtaacagttgtttgacaatcctaacggtaaggctatatttattgttggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35161 cctagaagtagtaacagttgtttgacaatcctaacggtaaggctatatttattgttggac 35102
Query: 241 ctgatctctagggaatggaacctttacctgagctgtggaagagttcggaggactttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35101 ctgatctctagggaatggaacctttacctgagctgtggaagagttcggaggactttgaaa 35042
Query: 301 ataaattgtggtgttcaagcatatgtccacgtgatatgaattcgaaatattcaagatatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35041 ataaattgtggtgttcaagcatatgtccacgtgatatgaattcgaaatattcaagatatc 34982
Query: 361 gcgaactaaaccaaaagcacaggggaaaccacaaaattcagagaagatgtttaaatatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34981 gcgaactaaaccaaaagcacaggggaaaccacaaaattcagagaagatgtttaaatatca 34922
Query: 421 taggagctttccatatccaaaaagtttgttcttgagtgcttagcaaggggggaccctaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34921 taggagctttccatatccaaaaagtttgttcttgagtgcttagcaaggggggaccctaca 34862
Query: 481 tttcaagaaatactttaaaaattgtagggggacccctttcaaaactcttacatggcatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34861 tttcaagaaatactttaaaaattgtagggggacccctttcaaaactcttacatggcatcc 34802
Query: 541 ataccagttacaagaaacaacagtagatcagatctgcttttcctcttggaacgcgaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34801 ataccagttacaagaaacaacagtagatcagatctgcttttcctcttggaacgcgaaaaa 34742
Query: 601 aatgactttttattttattttcaaagggt-ccccctgtgatttatgtataaaccatcaaa 659
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 34741 aatgactttttattttattttcaaagggtcccccctgtgatttatgtataaaccatcaaa 34682
Query: 660 aaamtgcttcgcttcagcattttcatcattttcacagggg-ccccccatgagatgttgaa 718
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 34681 aaactgcttcgcttcagcattttcatcattttcacaggggcccccccatgagatgttgaa 34622
Query: 719 ttatgaaccaccgtcctgacgtttctgagctgagggcatgggaagtagtctataatccgc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34621 ttatgaaccaccgtcctgacgtttctgagctgagggcatgggaagtagtctataatccgc 34562
Query: 779 gaaaattgcagcctaaatgttgtttctgtattaccacttttgattttgagggttgagcga 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34561 gaaaattgcagcctaaatgttgtttctgtattaccacttttgattttgagggttgagcga 34502
Query: 839 aagattcaactg-aaaamctcaactcggcactggaaaattgaagamcttcttcttccatc 897
|||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 34501 aagattcaactgaaaaacctcaactcggcactggaaaattgaagaccttcttcttccatc 34442
Query: 898 agawaaaatttgatatagaatgggttttcacaaggggggacccttgttamccttgttaat 957
||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||
Sbjct: 34441 agataaaatttgatatagaatgggttttcacaaggggggacccttgtaacccttgtaaat 34382
Query: 958 tattcacagaaaatgttgt 976
|||||||||||||||||||
Sbjct: 34381 tattcacagaaaatgttgt 34363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7953
Number of Sequences: 1807
Number of extensions: 7953
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)